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Species belonging to selected taxon:
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST008396
species:
Medicago truncatula
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCCGTCTCAAATT
miRNA*
TTTGAGACGGAGGAGTATTA
mismatches:
0
bulges:
1
View larger
pre-miRNA
CCAACTAAGAA
ATACTCCCTCCGTCTCAAATT
ATAAACAAAAAAATATTTTCACACTTATTAAGAAACTAAAATATTGTAGTTTGTAGTATGACTTCTTG
TGTTATCTTTGGAATAAGTTTCATAGAAAGATATAAAATCAATTTTCATTGGTTATTAGTTATAGAGAAAATTGAAAGAGAAAACATAGTAAATGCAAAT
TGCATTTAATTTCTCTTTGGAAAAGATGATTTTTTGAAAAAATATAATTAAATATAATAAAAGTTAGTCTTTTTTACTTATAATTTACGACAAAGAAAAT
GAATTTAATTCCTTATAA
TTTGAGACGGAGGAGTATTA
TTAATCTT
dot-bracket secondary structure
..........(
(((((((.(((((((((((((
((((......((.((..((((((..(((((..((((((........)))))).)))))))..(((((.
((((.(((.(((((....))))).)))(((.(((((..(((((((((.(((...........))).)))))))))((((((((......((((((((...
)))))))).))))))))((((((((((...((((((.....((((......))))..))))))...)))))))))).))))).)))..)))))))))..)
)))..)).))..))))))
))))))))))))))))))).
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
degradome data
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